Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008197.1 Corchorus capsularis cultivar CVL-1 contig08218, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24385

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4534--4620
44
2.0
44
86
6
124
28
27
17
26
1.97
6172--6259
45
2.0
45
93
0
149
23
21
19
35
1.96
10516--10556
15
2.7
15
88
3
55
80
0
19
0
0.71
15889--15969
29
2.7
29
83
7
101
22
22
12
43
1.86
16632--16690
29
2.0
29
90
6
93
47
15
16
20
1.83
22177--22204
14
2.0
14
100
0
56
71
0
28
0
0.86
22628--23258
315
2.0
314
93
2
1088
34
10
18
36
1.85
23482--23518
16
2.4
16
86
13
51
8
16
40
35
1.78

Tables:   1

The End!