Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008200.1 Corchorus capsularis cultivar CVL-1 contig08221, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2085

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
751--790
8
5.2
8
93
6
66
12
12
0
75
1.06
751--790
15
2.6
16
88
11
66
12
12
0
75
1.06
752--790
7
5.3
7
96
3
60
12
12
0
74
1.08
817--845
13
2.2
13
100
0
58
44
20
0
34
1.52
1130--1186
20
2.7
22
86
13
93
17
0
10
71
1.12
1125--1186
12
5.5
12
74
16
53
16
0
9
74
1.07
1482--1527
13
3.4
13
84
6
56
45
10
8
34
1.70
1490--1531
14
3.0
14
80
10
50
40
9
7
42
1.65
1490--1539
13
3.3
15
83
10
59
36
10
6
48
1.61
1621--1663
7
6.1
7
80
20
54
13
13
0
72
1.13
1614--1653
10
3.8
11
83
9
57
15
15
0
70
1.18
1612--1653
21
1.9
22
90
9
68
14
14
0
71
1.15
1605--1666
24
2.7
24
78
21
78
12
12
0
74
1.08

Tables:   1

The End!