Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008203.1 Corchorus capsularis cultivar CVL-1 contig08224, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12672

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1194--1232
20
2.0
20
94
0
69
66
12
12
7
1.43
2741--2766
6
4.3
6
100
0
52
34
0
15
50
1.45
3140--3204
21
3.3
21
72
24
77
52
20
21
6
1.68
3153--3184
17
1.9
17
93
6
57
50
12
28
9
1.71
3691--4148
233
2.0
234
92
2
778
32
25
20
20
1.97
4103--4199
32
3.0
32
83
0
122
22
28
22
25
1.99
10189--10227
21
1.9
21
94
5
71
33
7
38
20
1.81
12356--12445
39
2.3
39
84
5
119
24
12
7
55
1.63
12370--12454
39
2.2
39
87
8
127
21
14
8
56
1.64
12373--12453
40
2.0
40
90
4
128
22
14
8
54
1.67

Tables:   1

The End!