Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008204.1 Corchorus capsularis cultivar CVL-1 contig08225, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34438

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13431--13468
19
2.0
20
84
5
51
39
0
2
57
1.12
15468--15636
84
2.0
84
100
0
338
32
9
10
47
1.70
15717--15791
33
2.3
33
93
4
127
22
13
34
29
1.92
16190--16241
24
2.1
26
82
7
63
40
5
1
51
1.37
17571--17609
2
19.0
2
94
5
69
48
0
2
48
1.15
23833--23913
29
2.7
29
88
3
108
24
24
12
38
1.90
24605--24684
28
2.8
28
88
5
106
36
12
25
26
1.91
25714--25769
19
3.1
19
68
19
55
41
16
10
32
1.82

Tables:   1

The End!