Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008208.1 Corchorus capsularis cultivar CVL-1 contig08229, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2229

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1480--1547
31
2.2
31
86
5
93
50
8
16
25
1.73
1542--1601
22
2.7
23
87
5
72
50
8
23
18
1.74
1585--1891
54
5.8
54
83
10
386
53
6
14
25
1.64
1585--1891
105
2.9
105
95
1
533
53
6
14
25
1.64
2082--2228
66
2.3
63
81
9
165
55
6
19
19
1.64
2134--2227
43
2.2
41
87
7
127
55
5
19
20
1.62
2122--2226
20
4.9
20
77
12
95
54
5
19
20
1.64

Tables:   1

The End!