Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008229.1 Corchorus capsularis cultivar CVL-1 contig08250, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13796

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7538--7573
19
1.9
18
88
5
54
33
22
2
41
1.68
8762--8808
21
2.2
21
88
0
67
4
36
2
57
1.30
12967--13213
20
12.0
21
68
20
98
18
21
5
54
1.63
13061--13213
21
7.2
21
72
13
109
20
22
5
52
1.66
13045--13103
29
2.0
29
80
6
66
22
16
5
55
1.60
13071--13213
43
3.4
43
78
11
109
20
22
5
51
1.68
13111--13213
43
2.4
43
87
4
138
19
24
4
51
1.66

Tables:   1

The End!