Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008230.1 Corchorus capsularis cultivar CVL-1 contig08251, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21582

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5770--5876
53
2.0
53
100
0
214
52
12
7
28
1.65
7297--7351
24
2.5
24
82
11
73
9
9
18
63
1.49
7455--7539
41
2.1
41
89
8
129
14
11
18
55
1.69
7741--7781
21
2.0
21
85
0
55
14
41
9
34
1.79
8087--8154
26
2.6
26
86
9
102
33
1
10
54
1.43
8057--8148
13
7.1
13
70
24
61
33
1
8
56
1.37
8163--8215
25
2.2
23
86
6
70
45
1
18
33
1.61
8293--8336
21
2.1
21
91
0
70
36
9
40
13
1.76
18707--18797
46
2.0
46
100
0
182
27
19
13
39
1.89

Tables:   1

The End!