Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008232.1 Corchorus capsularis cultivar CVL-1 contig08253, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18171

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1618--1741
33
3.7
33
80
8
144
8
25
41
24
1.82
5012--5078
32
2.1
32
83
10
84
74
0
20
4
0.99
5032--5082
18
2.8
18
71
14
50
72
0
23
3
1.01
5116--5209
45
2.1
44
96
2
170
42
6
15
35
1.73
5926--5965
16
2.6
15
84
4
53
77
0
20
2
0.88
6232--6337
50
2.1
50
85
0
140
33
16
14
36
1.88
6804--7167
69
5.3
69
80
7
407
26
28
18
26
1.98
6804--7167
138
2.6
138
91
3
563
26
28
18
26
1.98
7273--7494
47
4.7
47
89
1
318
20
23
18
36
1.95
7273--7494
95
2.3
94
87
2
318
20
23
18
36
1.95
8820--8929
33
3.3
33
89
2
157
45
16
10
28
1.79
10451--10484
5
6.6
5
93
6
59
20
0
0
79
0.73
12547--12585
20
2.0
20
89
0
60
30
7
17
43
1.77

Tables:   1

The End!