Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008235.1 Corchorus capsularis cultivar CVL-1 contig08256, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8763

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
139--208
26
2.7
26
75
6
70
27
18
4
50
1.66
449--495
24
2.0
24
87
8
69
36
14
4
44
1.65
629--750
41
3.2
40
69
25
111
25
19
6
48
1.73
643--709
31
2.1
32
89
10
102
23
19
5
50
1.69
654--717
31
2.1
31
85
11
87
25
18
4
51
1.65
630--874
72
3.4
72
83
5
266
25
19
6
48
1.73
676--803
39
3.4
39
71
20
137
25
19
6
49
1.71
763--959
72
2.8
70
83
6
227
25
19
6
48
1.72
947--1294
55
6.3
55
92
0
552
27
18
5
48
1.70
2034--2551
50
10.2
50
76
4
473
38
16
3
42
1.65
2034--2551
101
5.1
101
88
2
754
38
16
3
42
1.65
2090--2569
51
9.5
50
70
13
259
37
16
3
42
1.67

Tables:   1

The End!