Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008236.1 Corchorus capsularis cultivar CVL-1 contig08257, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28175

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1698--1966
75
3.6
75
90
2
423
34
17
7
40
1.77
2549--2582
17
2.0
17
100
0
68
35
23
17
23
1.95
11338--11367
15
1.9
16
93
6
53
26
0
13
60
1.34
15707--15920
71
3.0
71
90
0
329
31
16
13
37
1.88
16853--16900
25
2.0
24
83
4
60
41
16
0
41
1.48
18362--18394
11
3.0
11
95
0
57
51
3
0
45
1.16
19934--19973
2
19.0
2
90
10
62
47
5
0
47
1.24
20111--20153
11
3.9
11
90
0
68
46
6
4
41
1.51
20107--20153
22
2.1
22
96
0
85
46
6
4
42
1.48
25580--25616
2
18.5
2
88
0
56
43
0
0
56
0.99

Tables:   1

The End!