Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008237.1 Corchorus capsularis cultivar CVL-1 contig08258, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39380

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1271--1304
2
17.0
2
100
0
68
50
0
0
50
1.00
4420--4602
97
1.9
97
95
0
330
36
13
22
27
1.92
5834--5864
13
2.4
13
94
0
53
38
9
9
41
1.71
25900--25945
19
2.4
19
92
0
74
39
0
19
41
1.52
26677--26745
35
2.1
33
91
8
113
18
23
14
43
1.87
27298--27346
25
2.0
25
95
0
89
12
20
20
46
1.82
27515--27562
22
2.2
22
84
0
60
10
10
56
22
1.63
30920--31810
440
2.0
439
86
3
1236
41
14
14
30
1.85
32247--32310
27
2.3
27
92
7
103
56
7
28
7
1.56
36619--36680
29
2.1
29
82
5
72
22
43
8
25
1.80

Tables:   1

The End!