Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008243.1 Corchorus capsularis cultivar CVL-1 contig08264, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29185

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
631--1406
258
3.0
258
99
0
1507
35
31
9
23
1.87
5776--5823
17
2.8
17
90
0
69
10
16
35
37
1.83
7793--7851
27
2.2
27
81
0
73
37
25
18
18
1.94
20567--20618
19
2.5
22
84
12
65
36
1
0
61
1.07
21061--21193
66
2.0
66
98
0
257
43
15
14
27
1.84
26251--26356
16
6.7
15
85
8
122
28
30
17
23
1.97
26252--26358
48
2.2
48
90
3
162
28
30
17
23
1.97
28247--28341
36
2.6
36
91
0
154
15
31
26
26
1.96

Tables:   1

The End!