Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008245.1 Corchorus capsularis cultivar CVL-1 contig08266, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19026

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
775--837
4
15.8
4
96
0
117
25
1
23
49
1.59
4859--4892
2
17.5
2
93
6
61
50
0
0
50
1.00
5908--6042
72
1.9
72
90
1
216
28
16
11
43
1.83
6861--6893
2
16.5
2
100
0
66
51
0
0
48
1.00
8038--8077
3
13.3
3
100
0
80
35
0
0
65
0.93

Tables:   1

The End!