Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008250.1 Corchorus capsularis cultivar CVL-1 contig08271, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35631

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2277--2396
38
3.2
38
95
3
208
45
15
14
25
1.84
2416--2479
32
2.0
32
100
0
128
37
0
12
50
1.41
10946--10974
14
2.1
14
100
0
58
6
13
24
55
1.63
11858--11924
29
2.2
29
84
5
80
31
16
17
34
1.93
16767--17179
75
5.5
75
86
2
560
25
33
26
14
1.94
16767--17179
151
2.7
150
87
2
560
25
33
26
14
1.94
17746--17782
19
2.0
18
89
5
56
40
13
21
24
1.89
22660--22700
21
2.0
21
95
0
73
43
12
9
34
1.75
23548--23578
15
2.1
15
100
0
62
41
19
6
32
1.77
25832--25863
3
10.3
3
93
6
55
65
0
0
34
0.93
32165--32189
12
2.1
12
100
0
50
92
0
0
8
0.40

Tables:   1

The End!