Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008257.1 Corchorus capsularis cultivar CVL-1 contig08278, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29393

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
325--382
29
2.0
29
93
0
98
43
15
18
22
1.88
790--865
32
2.4
30
71
20
73
51
7
6
34
1.57
1715--1739
13
1.9
13
100
0
50
0
28
0
72
0.86
10119--10371
126
2.0
126
99
0
497
28
11
18
41
1.86
17240--17289
8
6.0
8
78
21
50
2
28
0
70
0.99
17261--17286
3
8.7
3
100
0
52
0
30
0
69
0.89
17699--17842
57
2.5
57
86
2
191
33
19
22
24
1.97
17842--18018
30
5.9
30
87
2
212
39
20
19
20
1.93
18491--18548
24
2.3
26
91
8
93
67
3
27
1
1.17
18499--18549
15
3.8
15
69
28
51
66
3
27
1
1.20
22837--22865
15
1.9
15
100
0
58
44
0
0
55
0.99

Tables:   1

The End!