Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008260.1 Corchorus capsularis cultivar CVL-1 contig08281, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18056

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--29
2
14.5
2
100
0
58
51
0
0
48
1.00
3150--3184
17
2.1
17
100
0
70
42
11
0
45
1.40
3203--3261
31
1.9
31
85
0
82
33
13
3
49
1.59
4607--4822
109
2.0
108
90
2
346
33
11
8
46
1.69
6543--6592
19
2.5
22
81
12
63
30
4
24
42
1.73
6638--6681
23
1.9
23
90
0
70
18
20
9
52
1.72
8597--8631
16
2.2
16
89
0
52
45
5
0
48
1.26
12101--12457
156
2.3
153
79
8
355
32
14
18
34
1.91
12993--13035
21
2.0
21
90
0
68
25
34
18
20
1.96
13957--14018
31
2.0
32
81
9
74
29
30
19
20
1.97
15228--15652
42
10.6
42
68
14
245
39
20
13
26
1.90
15218--15652
118
3.6
118
81
3
494
39
20
13
26
1.90
15401--15542
76
1.9
76
82
5
180
38
18
15
27
1.91
17331--17405
30
2.5
31
82
6
91
29
26
16
28
1.96

Tables:   1

The End!