Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008263.1 Corchorus capsularis cultivar CVL-1 contig08284, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14793

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15--52
2
19.5
2
94
5
69
50
0
0
50
1.00
2807--2849
18
2.4
18
88
3
70
41
16
16
25
1.88
12263--12542
27
10.1
26
72
18
153
21
22
2
53
1.57
12745--12806
19
3.5
19
75
24
80
22
19
8
50
1.74
12759--12821
15
3.9
16
75
24
69
23
17
9
49
1.76
12706--12823
34
3.5
34
88
5
170
25
16
8
49
1.74
12779--13096
55
5.8
55
92
0
438
24
17
8
49
1.74
13953--14088
49
2.8
49
82
1
166
33
19
8
38
1.82

Tables:   1

The End!