Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008264.1 Corchorus capsularis cultivar CVL-1 contig08285, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45844

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1914--1992
40
2.0
40
92
0
131
43
15
12
29
1.83
7181--7214
5
6.8
5
100
0
68
41
17
0
41
1.50
9535--9568
15
2.2
16
89
5
52
0
5
17
76
0.98
23471--23497
3
9.0
3
100
0
54
66
0
0
33
0.92
25486--25518
2
16.5
2
100
0
66
51
0
0
48
1.00
25669--25704
3
12.3
3
94
5
65
33
0
0
66
0.92
31529--31560
16
2.0
16
100
0
64
43
6
12
37
1.68
44474--44534
29
2.1
30
87
9
90
22
24
11
40
1.87

Tables:   1

The End!