Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008268.1 Corchorus capsularis cultivar CVL-1 contig08289, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14323

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2445--2526
42
2.0
42
92
0
137
39
19
6
35
1.77
2801--3393
297
2.0
297
97
0
1114
26
28
18
26
1.98
3524--3563
15
2.7
15
92
3
64
52
0
0
47
1.00
5736--5761
12
2.2
12
100
0
52
34
42
7
15
1.75
6112--6153
21
2.0
21
100
0
84
28
23
33
14
1.94
6561--6600
19
2.1
19
100
0
80
60
0
30
10
1.30
6941--7007
19
3.4
19
74
13
64
2
23
0
73
0.97
6949--7009
17
3.5
17
76
10
61
3
26
0
70
1.02
7331--7398
34
2.0
34
100
0
136
26
17
26
29
1.98
9315--9373
9
6.6
9
79
14
59
72
0
0
27
0.84
9319--9371
18
2.9
18
88
0
88
73
0
0
26
0.83

Tables:   1

The End!