Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008274.1 Corchorus capsularis cultivar CVL-1 contig08295, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69034

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1079--1103
13
1.9
13
100
0
50
28
8
8
56
1.57
7508--7614
53
2.0
53
90
0
169
41
16
21
20
1.91
8498--8523
7
3.7
7
100
0
52
15
0
53
30
1.42
21487--21672
90
2.1
88
90
4
293
23
24
23
29
1.99
33024--33070
21
2.3
22
82
14
64
57
17
6
19
1.60
38121--38154
2
17.5
2
87
6
52
47
0
2
50
1.16
39281--39323
23
1.9
22
95
4
77
55
11
0
32
1.36
41962--41991
4
7.8
4
92
7
53
80
0
20
0
0.72
42171--42201
15
2.1
15
93
0
53
64
0
35
0
0.94
47163--47314
31
4.9
31
87
4
173
35
21
23
19
1.96
49225--49259
11
3.2
11
83
0
52
77
17
5
0
0.96
50545--50587
11
3.9
11
90
0
68
46
6
4
41
1.51
50541--50587
22
2.1
22
96
0
85
46
6
4
42
1.48
67344--67407
32
2.0
32
93
0
110
37
12
21
28
1.90

Tables:   1

The End!