Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008278.1 Corchorus capsularis cultivar CVL-1 contig08299, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29537

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
203--427
70
3.1
70
88
5
297
49
0
13
36
1.46
197--435
78
3.2
78
90
5
352
50
0
12
35
1.47
24433--24463
7
4.4
7
95
0
53
16
54
0
29
1.42
27798--28152
182
2.0
178
90
2
566
26
12
13
47
1.78
28366--28397
12
2.7
12
100
0
64
46
0
25
28
1.53
28427--28549
60
2.0
60
98
0
237
22
20
6
50
1.71
28931--28957
12
2.2
12
100
0
54
29
14
18
37
1.91
29316--29364
24
2.0
26
88
8
75
42
16
10
30
1.81
29455--29536
33
2.5
33
89
2
119
8
35
39
17
1.80

Tables:   1

The End!