Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008290.1 Corchorus capsularis cultivar CVL-1 contig08311, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8138

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
832--863
16
2.0
16
100
0
64
18
18
25
37
1.94
960--999
20
2.0
20
85
0
53
55
7
15
22
1.65
5079--5110
11
2.9
11
90
0
55
37
0
18
43
1.51
5079--5138
22
2.9
22
76
19
65
41
3
16
38
1.65
5089--5126
19
2.1
18
90
5
58
44
2
18
34
1.64
6466--6496
6
5.3
6
96
3
55
35
0
12
51
1.40

Tables:   1

The End!