Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008293.1 Corchorus capsularis cultivar CVL-1 contig08314, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58241

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--3341
482
7.0
480
90
2
5118
29
17
18
35
1.94
1--3339
963
3.5
962
90
2
5147
29
17
18
35
1.94
4356--4980
314
2.0
310
97
1
1178
31
15
17
35
1.91
9419--9474
27
2.1
26
78
12
60
32
17
26
23
1.97
11533--11569
17
2.2
17
100
0
74
37
5
27
29
1.79
13579--13622
21
2.1
21
91
0
70
22
29
11
36
1.89
13717--13763
16
2.8
17
75
18
53
10
36
38
14
1.81
13816--13883
33
2.1
33
85
0
91
13
35
36
14
1.85
13883--13958
33
2.3
33
100
0
152
7
28
39
23
1.83
18637--18813
96
1.9
95
89
1
273
32
9
20
37
1.84
38907--38932
3
8.7
3
100
0
52
69
0
0
30
0.89

Tables:   1

The End!