Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008303.1 Corchorus capsularis cultivar CVL-1 contig08324, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32524

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2505--2558
23
2.3
23
87
6
74
40
9
3
46
1.54
7133--7174
19
2.3
18
84
8
57
35
2
0
61
1.09
7881--7910
12
2.5
12
94
0
51
76
13
0
10
1.01
16772--16803
2
16.0
2
100
0
64
50
0
0
50
1.00
18467--18515
17
2.9
17
96
0
89
22
34
14
28
1.93
27766--27830
31
2.1
31
97
0
121
20
16
23
40
1.92
32094--32126
13
2.5
13
95
0
57
21
12
9
57
1.62
32123--32161
6
6.5
6
100
0
78
30
0
15
53
1.42

Tables:   1

The End!