Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008305.1 Corchorus capsularis cultivar CVL-1 contig08326, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10772

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1948--1972
10
2.5
10
100
0
50
48
20
8
24
1.76
2905--2943
13
3.1
13
88
3
62
23
12
7
56
1.62
2943--2969
6
4.5
6
100
0
54
29
0
14
55
1.40
3267--3351
41
2.1
40
84
8
109
34
11
5
48
1.64
3362--3437
37
2.1
37
82
9
93
30
10
2
56
1.47
3362--3453
38
2.5
36
81
11
98
27
11
4
56
1.54
5776--5820
13
3.5
13
90
3
74
22
13
8
55
1.65
5817--5843
6
4.5
6
100
0
54
29
0
14
55
1.40
6121--6217
33
2.9
33
77
6
106
10
28
39
21
1.86

Tables:   1

The End!