Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008308.1 Corchorus capsularis cultivar CVL-1 contig08329, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20653

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
633--662
2
15.0
2
100
0
60
50
0
0
50
1.00
753--810
5
11.8
5
87
9
68
18
0
0
81
0.70
760--809
4
11.8
4
91
8
57
20
0
0
80
0.72
754--809
28
2.0
29
86
10
80
19
0
0
80
0.71
759--818
28
2.1
28
82
11
70
18
3
0
78
0.89
15114--16193
36
28.8
40
80
11
564
44
11
19
24
1.84
15114--15583
79
5.9
79
81
8
436
42
13
19
24
1.88
15114--15590
203
2.4
197
81
12
549
42
13
19
23
1.87
15110--15583
159
3.0
157
83
7
550
42
13
19
23
1.87
15361--16404
36
28.7
36
80
9
801
44
10
19
24
1.83
15357--16440
72
14.9
72
80
9
894
44
10
19
24
1.83
15436--16440
319
3.1
316
82
8
1005
44
10
19
24
1.82
15552--16510
36
26.9
36
80
8
509
45
10
19
24
1.81
19256--19280
13
1.9
13
100
0
50
56
0
0
44
0.99
19252--19365
11
10.8
11
71
14
80
54
0
2
42
1.14
19269--19351
20
4.2
20
73
11
73
51
0
3
44
1.18

Tables:   1

The End!