Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008321.1 Corchorus capsularis cultivar CVL-1 contig08342, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26393

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1024--1061
2
19.0
2
94
0
67
50
0
2
47
1.15
14754--14780
14
1.9
14
100
0
54
0
40
0
59
0.98
20533--20561
2
14.5
2
100
0
58
48
0
0
51
1.00
20969--21469
47
10.7
47
90
2
740
41
9
11
37
1.74
20969--21469
189
2.7
189
90
2
769
41
9
11
37
1.74
21452--21594
43
3.4
42
82
3
153
38
14
16
30
1.88
21478--21635
41
3.8
41
83
5
140
34
13
17
34
1.89

Tables:   1

The End!