Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008325.1 Corchorus capsularis cultivar CVL-1 contig08346, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2130

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
543--578
6
6.2
6
87
6
56
63
0
36
0
0.94
543--578
17
2.1
17
94
0
63
63
0
36
0
0.94
598--682
21
3.4
25
77
19
106
34
11
48
5
1.64
560--823
134
2.0
134
100
0
528
39
11
39
9
1.75
732--816
21
3.4
25
77
19
106
34
11
48
5
1.64
968--1459
220
2.2
218
89
3
736
27
24
27
20
1.99
1850--1924
32
2.3
32
84
11
107
24
21
25
29
1.99

Tables:   1

The End!