Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008332.1 Corchorus capsularis cultivar CVL-1 contig08353, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7929

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
487--527
2
20.5
2
100
0
82
51
0
0
48
1.00
1881--1953
31
2.4
31
88
4
103
30
15
5
49
1.67
1972--2018
24
2.0
24
82
0
58
38
6
2
53
1.39
2263--2324
22
2.8
22
97
0
115
33
12
16
37
1.87
2217--2379
22
7.3
22
75
5
103
31
9
19
39
1.83
2498--2807
44
6.9
45
69
16
139
42
9
12
36
1.75
2499--2783
22
12.8
22
68
20
105
41
8
12
36
1.75
2576--2715
68
2.1
64
82
10
158
43
8
10
37
1.70
2644--2808
88
1.9
87
82
6
208
44
8
10
36
1.70
2889--2955
19
3.5
19
87
2
98
44
11
19
23
1.84
2946--3482
22
24.7
22
68
12
112
39
8
14
36
1.78
5267--5432
84
2.0
84
91
0
269
28
26
18
25
1.98

Tables:   1

The End!