Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008333.1 Corchorus capsularis cultivar CVL-1 contig08354, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33971

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1020--1198
92
1.9
93
86
3
254
41
13
20
24
1.89
4251--4292
6
7.0
6
100
0
84
16
33
16
33
1.92
8641--8715
36
2.1
36
100
0
150
30
16
8
45
1.75
11621--11688
34
2.0
34
88
0
100
27
20
20
30
1.98
22824--22886
22
2.8
22
92
2
108
4
12
26
55
1.57
28565--29013
166
2.7
166
83
4
584
30
14
16
38
1.88
29675--29699
2
12.5
2
100
0
50
48
0
0
52
1.00
32013--32050
17
2.2
18
90
4
60
23
34
13
28
1.92

Tables:   1

The End!