Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008337.1 Corchorus capsularis cultivar CVL-1 contig08358, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41055

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--71
2
33.0
2
100
0
132
0
50
0
50
1.00
2447--2473
2
13.5
2
100
0
54
51
0
0
48
1.00
7462--7500
16
2.4
16
86
0
51
51
0
5
43
1.24
8797--8830
17
2.0
17
88
0
50
52
0
11
35
1.38
10806--10857
17
3.1
17
85
0
77
25
15
32
26
1.95
11191--11735
156
3.5
155
79
6
469
33
21
13
31
1.92
16981--17010
2
15.0
2
100
0
60
50
0
0
50
1.00
17655--17694
19
2.0
19
85
9
53
22
10
2
65
1.35
24234--24267
17
2.1
17
88
5
52
64
0
0
35
0.94
27113--27667
154
3.6
155
89
2
785
34
19
14
31
1.92
33653--33724
32
2.2
32
80
0
81
47
13
8
30
1.73

Tables:   1

The End!