Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008342.1 Corchorus capsularis cultivar CVL-1 contig08363, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14381

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2089--2507
209
2.0
209
99
0
820
23
22
24
29
1.99
4008--4057
22
2.3
22
78
0
55
14
20
6
60
1.55
6853--6971
46
2.5
48
94
2
215
58
10
24
6
1.54
8876--9303
69
6.2
69
81
6
456
26
26
18
28
1.98
8876--9303
205
2.1
206
84
3
549
26
26
18
28
1.98
9412--9695
47
6.0
47
89
0
388
20
25
19
34
1.96
10030--10107
28
2.9
27
85
10
108
23
17
19
39
1.92
10727--10768
19
2.2
19
87
8
59
64
0
2
33
1.07

Tables:   1

The End!