Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008344.1 Corchorus capsularis cultivar CVL-1 contig08365, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30889

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3450--3723
135
2.0
135
97
0
512
29
23
11
35
1.90
8078--8108
4
7.8
4
100
0
62
51
22
0
25
1.48
8295--8333
18
2.2
18
90
0
60
33
23
0
43
1.54
8336--8393
29
2.0
29
86
3
80
39
15
6
37
1.74
14957--15006
6
8.3
6
91
6
57
8
22
0
70
1.13
14991--15037
14
3.3
13
81
18
58
2
14
2
80
0.89
19376--19410
11
3.2
11
91
0
61
80
17
2
0
0.84
24176--24201
2
13.0
2
100
0
52
50
0
0
50
1.00
24487--24674
93
2.0
93
85
6
256
23
20
14
41
1.89
26406--26817
216
1.9
216
96
0
770
27
18
18
35
1.95
29856--29880
2
12.5
2
100
0
50
48
0
0
52
1.00
30694--30750
22
2.5
22
86
8
71
36
21
0
42
1.53
30749--30852
26
4.0
26
77
14
108
53
9
1
34
1.45
30749--30852
52
2.0
51
81
9
122
53
9
1
34
1.45

Tables:   1

The End!