Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008345.1 Corchorus capsularis cultivar CVL-1 contig08366, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24312

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3941--3978
16
2.3
16
90
4
58
26
52
18
2
1.58
4726--4776
17
2.9
18
85
8
70
25
50
21
1
1.59
4724--4778
23
2.4
23
90
6
85
29
47
21
1
1.61
4726--4778
11
4.6
11
79
6
61
28
49
20
1
1.60
4767--4837
16
4.5
16
89
1
108
40
39
14
5
1.69
4724--4778
6
9.5
6
82
7
69
29
47
21
1
1.61
5257--5286
15
2.0
15
93
0
51
6
3
6
83
0.90
12866--12924
19
2.9
21
85
7
77
38
15
13
32
1.86
22156--22218
25
2.6
25
82
2
83
38
23
4
33
1.76
22192--22221
15
2.0
15
100
0
60
46
26
0
26
1.53
24250--24290
2
21.0
2
85
5
57
51
0
0
48
1.00
24235--24286
25
2.0
27
88
7
81
51
0
0
48
1.00

Tables:   1

The End!