Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008354.1 Corchorus capsularis cultivar CVL-1 contig08375, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22514

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4282--4524
123
2.0
123
82
1
299
38
18
10
33
1.84
5225--5318
49
1.9
49
93
0
161
38
17
10
34
1.84
6282--6311
2
15.0
2
92
0
51
50
3
0
46
1.18
6678--6718
20
2.0
20
95
0
73
41
4
19
34
1.73
8174--8217
17
2.7
16
75
6
52
45
34
18
2
1.62
8302--8348
17
2.9
17
76
20
55
55
0
4
40
1.19
9094--9146
17
3.2
17
70
24
58
39
20
15
24
1.91
9704--9737
17
2.0
17
88
0
50
20
2
61
14
1.46
16546--16584
15
2.6
15
84
15
62
10
74
0
15
1.07
16530--16584
16
3.6
16
80
7
60
10
72
0
16
1.11
17503--17555
16
3.3
16
84
10
81
11
11
24
52
1.70
19559--19587
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!