Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000836.1 Corchorus capsularis cultivar CVL-1 contig00836, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1173

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
257--334
22
3.6
22
79
6
88
34
14
7
43
1.74
338--400
22
2.8
23
80
7
76
36
7
14
41
1.75
385--484
21
4.5
22
72
15
82
32
13
11
44
1.78
368--646
22
12.5
22
68
18
71
35
16
10
38
1.82
682--747
22
2.9
22
84
4
78
40
21
6
31
1.77

Tables:   1

The End!