Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008364.1 Corchorus capsularis cultivar CVL-1 contig08385, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11208

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
326--367
22
1.9
22
85
0
57
38
26
23
11
1.90
2580--2734
70
2.2
70
88
2
222
50
1
12
35
1.48
2857--3031
84
2.1
84
81
10
207
48
1
14
36
1.51
3559--3588
15
1.9
16
93
6
53
63
36
0
0
0.95
3962--4255
109
2.7
109
93
3
473
49
1
11
37
1.49

Tables:   1

The End!