Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008365.1 Corchorus capsularis cultivar CVL-1 contig08386, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42654

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2861--2890
2
15.0
2
100
0
60
50
0
0
50
1.00
6210--6239
15
2.0
15
93
0
51
30
20
10
40
1.85
7827--7926
4
24.5
4
89
4
74
45
9
5
41
1.57
8014--8047
2
17.0
2
100
0
68
50
0
0
50
1.00
16687--16733
23
2.0
23
95
0
85
42
17
4
36
1.68
20883--20937
24
2.3
23
87
3
74
27
29
3
40
1.73
30957--31005
24
2.0
24
92
0
80
18
18
26
36
1.94
30960--31011
24
2.2
24
85
0
68
21
17
23
38
1.93
40700--40945
78
3.1
78
84
8
323
37
12
2
47
1.54
42625--42654
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!