Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008367.1 Corchorus capsularis cultivar CVL-1 contig08388, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19681

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1236--1539
167
1.8
169
95
2
560
31
10
15
42
1.82
11267--11307
21
2.0
21
85
4
57
17
7
24
51
1.70
11560--11615
25
2.2
25
84
6
69
25
8
10
55
1.63
13622--13726
52
2.0
52
96
0
192
30
20
13
36
1.91
16976--17072
48
2.0
48
93
0
167
35
10
19
35
1.86
18061--18146
45
1.9
45
95
0
154
32
17
23
26
1.96
19646--19678
2
16.5
2
100
0
66
51
0
0
48
1.00

Tables:   1

The End!