Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008370.1 Corchorus capsularis cultivar CVL-1 contig08391, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28020

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2381--2445
31
2.1
32
82
2
78
35
10
20
33
1.87
16559--16613
19
2.8
18
83
13
56
38
5
5
50
1.48
16579--16614
18
2.0
18
94
0
63
36
5
5
52
1.48
20349--20374
2
13.0
2
100
0
52
50
0
0
50
1.00
20499--20551
22
2.4
22
84
6
63
39
5
9
45
1.60
20555--20604
22
2.3
22
85
0
64
26
14
4
56
1.56
20767--20868
23
4.5
23
79
8
93
39
14
8
37
1.78
20586--21013
22
19.6
22
70
10
191
35
15
10
38
1.82
21166--21250
44
1.9
44
83
9
111
36
15
9
38
1.80
21168--21296
66
1.9
67
84
6
172
36
13
9
41
1.76
21167--21298
22
5.9
23
73
12
87
35
13
9
41
1.76
21169--21496
22
14.7
22
66
18
78
36
16
8
38
1.80
21540--21673
22
6.0
21
76
10
115
39
18
8
33
1.81
21541--21674
68
2.0
66
82
5
162
40
17
8
33
1.80
21837--21874
19
2.0
20
85
15
53
63
2
5
28
1.30
22212--22278
31
2.1
32
81
10
84
49
4
13
32
1.62
22219--22284
31
2.1
32
86
5
91
50
4
16
28
1.65
23677--23734
27
2.1
27
83
0
71
34
3
31
31
1.74

Tables:   1

The End!