Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008373.1 Corchorus capsularis cultivar CVL-1 contig08394, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11238

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
805--878
33
2.2
34
88
7
116
9
28
39
22
1.85
3596--3742
75
2.0
75
83
0
186
38
9
21
31
1.85
4087--4126
12
3.4
11
86
13
53
77
0
20
2
0.88
4171--4308
44
3.1
44
87
2
213
36
7
17
37
1.79
5783--5881
50
2.0
50
85
0
135
35
17
12
35
1.87
6343--7480
69
16.6
69
87
1
1536
25
28
18
27
1.98
6343--7480
137
8.3
138
88
1
1536
25
28
18
27
1.98
6343--7480
208
5.5
208
92
1
1639
25
28
18
27
1.98
7838--7910
27
2.7
27
80
0
83
13
12
28
45
1.80
8237--8270
14
2.4
14
95
0
59
23
11
14
50
1.76
8411--8449
20
2.0
20
89
0
60
28
10
20
41
1.85
10273--10305
2
17.5
2
87
12
52
51
0
0
48
1.00

Tables:   1

The End!