Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008378.1 Corchorus capsularis cultivar CVL-1 contig08399, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14577

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4642--4706
29
2.3
29
82
12
73
44
13
16
24
1.85
6899--6962
30
2.1
31
83
11
80
18
20
14
46
1.83
7216--7263
24
2.0
24
100
0
96
45
12
12
29
1.78
8719--8745
14
1.9
14
100
0
54
22
7
37
33
1.82
9305--9444
63
2.2
64
88
1
210
15
10
35
38
1.82
9305--9444
32
4.4
32
88
1
210
15
10
35
38
1.82
9592--9692
16
6.3
16
81
0
103
6
12
28
51
1.66
9592--9707
32
3.6
32
88
0
169
7
12
28
51
1.66
9600--9731
64
2.1
64
81
2
149
8
12
30
48
1.71
12390--12480
33
2.8
33
84
0
128
32
19
24
23
1.97

Tables:   1

The End!