Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008380.1 Corchorus capsularis cultivar CVL-1 contig08401, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20872

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
150--192
19
2.1
21
83
8
54
37
2
9
51
1.47
6460--6487
3
9.3
3
100
0
56
0
32
0
67
0.91
8260--8326
15
4.5
15
82
0
80
11
8
37
41
1.73
10750--10797
23
2.3
20
75
24
55
12
43
8
35
1.73
13431--13484
24
2.3
23
79
20
58
18
16
1
62
1.41
18053--18417
187
2.0
186
97
0
685
35
11
15
37
1.83
18566--18591
2
13.0
2
100
0
52
50
0
0
50
1.00
18785--18809
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!