Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008383.1 Corchorus capsularis cultivar CVL-1 contig08404, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35793

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6604--6831
114
2.0
114
92
0
384
35
17
23
22
1.95
9802--9852
26
1.9
27
88
4
77
41
0
3
54
1.19
9946--9972
10
2.7
10
100
0
54
44
29
18
7
1.77
11316--11391
30
2.4
32
84
8
120
44
0
36
18
1.50
11998--12048
26
1.9
27
84
11
70
39
11
33
15
1.84
18370--18447
39
2.0
39
100
0
156
41
10
17
30
1.83
29978--30042
30
2.1
31
94
2
114
32
18
3
46
1.65
33099--33129
16
1.9
16
93
0
53
9
19
6
64
1.45
33172--33278
53
2.0
53
98
0
205
42
11
6
40
1.67
34013--34048
14
2.5
15
90
9
65
13
25
5
55
1.60

Tables:   1

The End!