Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008384.1 Corchorus capsularis cultivar CVL-1 contig08405, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71640

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2944--3037
47
2.0
48
85
6
129
57
1
6
35
1.31
11143--11177
7
5.0
7
100
0
70
28
0
42
28
1.56
11143--11184
21
2.0
21
90
0
66
33
0
40
26
1.56
25607--25647
22
1.9
22
85
5
57
31
4
43
19
1.72
26799--26831
16
2.0
17
88
5
50
63
6
18
12
1.48
36151--36429
142
2.0
141
97
0
522
27
17
22
32
1.96
36652--36739
45
2.0
45
100
0
176
20
17
23
38
1.93
41557--41619
29
2.1
30
82
2
74
20
34
12
31
1.90
46092--46130
18
2.1
19
85
4
53
33
25
2
38
1.70
51230--51279
19
2.5
20
83
6
57
8
14
4
74
1.20
61515--61618
54
1.9
54
94
0
181
43
21
20
15
1.88
67447--67621
84
2.1
84
98
0
341
56
9
23
10
1.63
68121--68156
17
2.1
17
100
0
72
11
11
25
52
1.69
70528--70734
108
1.9
109
87
2
308
17
15
24
42
1.87

Tables:   1

The End!