Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008392.1 Corchorus capsularis cultivar CVL-1 contig08413, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28537

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5173--5204
11
2.9
11
90
0
55
37
0
18
43
1.51
5173--5232
22
2.9
22
76
19
65
41
3
18
36
1.67
5183--5220
19
2.1
18
90
5
58
44
2
21
31
1.66
8016--8045
11
2.7
11
94
0
51
33
30
6
30
1.83
9387--9422
3
12.0
3
100
0
72
66
0
0
33
0.92
19556--19594
6
6.0
6
83
16
51
79
2
15
2
0.95
27274--27318
20
2.2
20
84
4
54
66
8
6
17
1.40

Tables:   1

The End!