Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008400.1 Corchorus capsularis cultivar CVL-1 contig08421, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20196

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2757--2794
18
2.1
18
100
0
76
44
23
10
21
1.83
4363--4400
18
2.1
18
90
0
58
7
31
21
39
1.82
4473--4537
32
2.0
32
87
0
94
38
18
10
32
1.85
16591--16695
33
3.2
33
72
10
88
23
9
20
46
1.79
16711--16784
33
2.2
34
85
7
116
35
6
17
40
1.76
16725--16796
33
2.2
33
84
0
90
29
8
20
41
1.81
17268--17292
9
2.8
9
100
0
50
24
20
44
12
1.85

Tables:   1

The End!