Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008401.1 Corchorus capsularis cultivar CVL-1 contig08422, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22354

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
612--669
30
1.9
31
86
10
84
25
25
17
31
1.97
3752--4273
178
2.9
176
97
1
999
33
18
20
27
1.96
12428--12459
16
1.9
17
93
6
57
12
6
18
62
1.50
12999--13034
8
4.5
8
100
0
72
0
38
0
61
0.96
18805--18840
2
18.5
2
94
5
65
52
0
0
47
1.00
18936--19037
50
2.0
50
90
0
159
23
9
23
43
1.83
21129--21210
41
2.0
41
90
0
128
14
15
10
58
1.63

Tables:   1

The End!