Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008404.1 Corchorus capsularis cultivar CVL-1 contig08425, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29645

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2280--2322
21
2.0
21
82
13
52
37
20
11
30
1.89
3248--3283
10
3.7
10
96
3
65
30
0
11
58
1.33
6987--7050
32
2.0
32
87
0
92
32
29
21
15
1.95
7009--7065
16
3.7
16
73
13
57
35
33
19
12
1.89
7007--7074
32
2.1
32
84
10
86
33
33
20
11
1.89
8548--8580
17
1.9
17
93
0
57
33
6
18
42
1.75
8651--8727
40
1.9
41
86
2
111
27
2
23
46
1.65
9709--9756
17
2.8
17
81
12
62
31
27
10
31
1.90
22607--22674
34
2.0
34
91
0
109
8
17
35
38
1.81

Tables:   1

The End!