Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008406.1 Corchorus capsularis cultivar CVL-1 contig08427, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54564

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5848--5897
23
2.2
23
82
7
57
74
4
14
8
1.20
18144--18180
19
2.0
18
89
5
56
40
2
21
35
1.68
31962--32086
54
2.3
54
90
4
189
33
6
7
52
1.54
36443--36486
23
2.0
22
81
4
52
22
15
9
52
1.71
37772--37879
41
2.7
41
80
9
123
50
23
14
12
1.76
40389--40425
16
2.3
16
90
0
56
51
32
13
2
1.55
41378--41436
31
1.9
31
85
0
82
30
16
5
47
1.69
49700--49744
21
2.1
21
83
0
54
35
15
26
22
1.94
52977--53004
9
3.1
9
100
0
56
10
0
0
89
0.49
54418--54531
36
3.2
36
87
7
160
29
21
9
38
1.86

Tables:   1

The End!